Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ptcd1Q8C2E4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Gm24543-201ENSMUST00000103867 82 ntBASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptcd1Q8C2E4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptcd1Q8C2E4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Gm12138-201ENSMUST00000122180 951 ntBASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptcd1Q8C2E4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms