Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Cdk5rap1Q8BTW8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm5779-201ENSMUST00000218467 910 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap1Q8BTW8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Asic1-205ENSMUST00000228185 1818 ntBASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap1Q8BTW8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdk5rap1Q8BTW8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 284.8 ms