Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Gm7787-201ENSMUST00000216858 688 ntBASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Gm10819-201ENSMUST00000099988 561 ntBASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Gm11452-201ENSMUST00000122376 690 ntBASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne3Q8BT60 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Gm7230-201ENSMUST00000173026 815 ntBASIC14.28□□□□□ -0.12
Cpne3Q8BT60 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Gm43767-201ENSMUST00000198933 381 ntBASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpne3Q8BT60 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms