Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Gm8062-201ENSMUST00000139696 444 ntBASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Col16a1Q8BLX7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Gm15957-201ENSMUST00000118893 974 ntBASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col16a1Q8BLX7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 AC102291.3-201ENSMUST00000226566 405 ntBASIC19.08■□□□□ 0.65
Col16a1Q8BLX7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col16a1Q8BLX7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Gm18307-201ENSMUST00000206864 949 ntBASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col16a1Q8BLX7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms