Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Gm8749-201ENSMUST00000117737 331 ntBASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Gm16476-201ENSMUST00000221544 139 ntBASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.71■□□□□ 0.1
Smarcal1Q8BJL0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcal1Q8BJL0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
Smarcal1Q8BJL0 Asic1-205ENSMUST00000228185 1818 ntBASIC15.71■□□□□ 0.1
Smarcal1Q8BJL0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Smarcal1Q8BJL0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcal1Q8BJL0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Gm6222-201ENSMUST00000120787 396 ntBASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Gm3436-201ENSMUST00000179930 840 ntBASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Gm9182-201ENSMUST00000217829 639 ntBASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcal1Q8BJL0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Gm2451-201ENSMUST00000199447 999 ntBASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Gm10290-201ENSMUST00000200451 999 ntBASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms