Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Chmp2bQ8BJF9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp2bQ8BJF9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp2bQ8BJF9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms