Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm37055-201ENSMUST00000191866 133 ntBASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc5a7Q8BGY9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Gm13312-201ENSMUST00000119631 718 ntBASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Gm8344-201ENSMUST00000119813 856 ntBASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc5a7Q8BGY9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc5a7Q8BGY9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Gm43767-201ENSMUST00000198933 381 ntBASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc5a7Q8BGY9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Gm6623-201ENSMUST00000173570 544 ntBASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Gm22240-201ENSMUST00000175225 82 ntBASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Slc5a7Q8BGY9 Gm18622-201ENSMUST00000219361 595 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms