Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim6Q8BGE7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.73■□□□□ 0.11
Trim6Q8BGE7 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trim6Q8BGE7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Gm8097-201ENSMUST00000117903 829 ntBASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim6Q8BGE7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.71■□□□□ 0.11
Trim6Q8BGE7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms