Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Gm13453-201ENSMUST00000118708 357 ntBASIC14.13□□□□□ -0.15
Vrk1Q80X41 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.13□□□□□ -0.15
Vrk1Q80X41 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vrk1Q80X41 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Gm13015-201ENSMUST00000118674 204 ntBASIC14.12□□□□□ -0.15
Vrk1Q80X41 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Mir8102-201ENSMUST00000184148 139 ntBASIC14.12□□□□□ -0.15
Vrk1Q80X41 Gm27989-201ENSMUST00000184721 107 ntBASIC14.12□□□□□ -0.15
Vrk1Q80X41 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Gm6888-201ENSMUST00000221983 706 ntBASIC14.12□□□□□ -0.15
Vrk1Q80X41 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.12□□□□□ -0.15
Vrk1Q80X41 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vrk1Q80X41 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.11□□□□□ -0.15
Vrk1Q80X41 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Gm29541-201ENSMUST00000191351 678 ntBASIC14.11□□□□□ -0.15
Vrk1Q80X41 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.11□□□□□ -0.15
Vrk1Q80X41 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.11□□□□□ -0.15
Vrk1Q80X41 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vrk1Q80X41 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vrk1Q80X41 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Vrk1Q80X41 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms