Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Gm22175-201ENSMUST00000175007 78 ntBASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Pcdh8Q7TSK3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Pcdh8Q7TSK3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh8Q7TSK3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh8Q7TSK3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm22065-201ENSMUST00000103753 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm22066-201ENSMUST00000103761 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm24932-201ENSMUST00000103763 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm24115-201ENSMUST00000103799 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm22190-201ENSMUST00000103827 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm22191-201ENSMUST00000103831 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm24721-201ENSMUST00000103849 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm28018-201ENSMUST00000103869 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm26399-201ENSMUST00000103937 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm18737-201ENSMUST00000173594 937 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm25349-201ENSMUST00000177728 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm23616-201ENSMUST00000177797 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm25871-201ENSMUST00000177816 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm24752-201ENSMUST00000178240 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm24496-201ENSMUST00000178287 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm25649-201ENSMUST00000178476 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm25548-201ENSMUST00000178681 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm23147-201ENSMUST00000178841 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm26095-201ENSMUST00000179270 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm22171-201ENSMUST00000179283 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm23936-201ENSMUST00000179354 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm22619-201ENSMUST00000179516 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm25255-201ENSMUST00000179579 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm24755-201ENSMUST00000179691 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm26506-201ENSMUST00000179692 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm25086-201ENSMUST00000179931 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm23243-201ENSMUST00000180047 110 ntBASIC14.57□□□□□ -0.08
Pcdh8Q7TSK3 Gm24659-201ENSMUST00000180212 110 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms