Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Gm8749-201ENSMUST00000117737 331 ntBASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Gm20553-201ENSMUST00000204205 844 ntBASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Exosc3Q7TQK4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Gm2213-201ENSMUST00000197485 688 ntBASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Exosc3Q7TQK4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Exosc3Q7TQK4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms