Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Gm18489-201ENSMUST00000172565 551 ntBASIC12.06□□□□□ -0.48
Vma21Q78T54 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Gm18669-201ENSMUST00000216049 778 ntBASIC12.06□□□□□ -0.48
Vma21Q78T54 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.06□□□□□ -0.48
Vma21Q78T54 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Gm11780-201ENSMUST00000136880 516 ntBASIC12.05□□□□□ -0.48
Vma21Q78T54 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Vma21Q78T54 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.05□□□□□ -0.48
Vma21Q78T54 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.05□□□□□ -0.48
Vma21Q78T54 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vma21Q78T54 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vma21Q78T54 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.04□□□□□ -0.48
Vma21Q78T54 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms