Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gm23547-201ENSMUST00000158210 271 ntBASIC15.34■□□□□ 0.05
Cspg5Q71M36 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gm5866-201ENSMUST00000177881 973 ntBASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gm17837-201ENSMUST00000186435 985 ntBASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.34■□□□□ 0.05
Cspg5Q71M36 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.34■□□□□ 0.05
Cspg5Q71M36 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg5Q71M36 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg5Q71M36 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.33■□□□□ 0.05
Cspg5Q71M36 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg5Q71M36 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cspg5Q71M36 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Gm18057-201ENSMUST00000208220 503 ntBASIC15.33■□□□□ 0.04
Cspg5Q71M36 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.33■□□□□ 0.04
Cspg5Q71M36 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.33■□□□□ 0.04
Cspg5Q71M36 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg5Q71M36 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.32■□□□□ 0.04
Cspg5Q71M36 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.32■□□□□ 0.04
Cspg5Q71M36 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg5Q71M36 Gm8410-201ENSMUST00000117225 605 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms