Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Gm15824-201ENSMUST00000119516 955 ntBASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Gm9899-201ENSMUST00000065519 555 ntBASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx55Q6ZPL9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Gm9002-201ENSMUST00000178437 499 ntBASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Gm5035-201ENSMUST00000215581 927 ntBASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx55Q6ZPL9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx55Q6ZPL9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx55Q6ZPL9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx55Q6ZPL9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Gm33320-201ENSMUST00000192232 530 ntBASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx55Q6ZPL9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms