Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc44a1Q6X893 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Gm37230-201ENSMUST00000194491 818 ntBASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Gm43125-201ENSMUST00000201724 730 ntBASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a1Q6X893 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Gm43474-201ENSMUST00000196415 774 ntBASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc44a1Q6X893 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Gm26308-201ENSMUST00000157768 69 ntBASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Gm38225-201ENSMUST00000194001 393 ntBASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a1Q6X893 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Gm8396-201ENSMUST00000057361 823 ntBASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms