Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nup98Q6PFD9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nup98Q6PFD9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Gm6180-201ENSMUST00000065243 498 ntBASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Gm15393-201ENSMUST00000120499 219 ntBASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nup98Q6PFD9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Gm23984-201ENSMUST00000157139 203 ntBASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Gm5279-201ENSMUST00000199575 745 ntBASIC17.18■□□□□ 0.34
Nup98Q6PFD9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup98Q6PFD9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.17■□□□□ 0.34
Nup98Q6PFD9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup98Q6PFD9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Gm28631-201ENSMUST00000190740 334 ntBASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup98Q6PFD9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms