Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Gm5682-201ENSMUST00000173402 505 ntBASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Gm27459-201ENSMUST00000184860 107 ntBASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Gm4535-201ENSMUST00000182274 558 ntBASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Gm9682-201ENSMUST00000197505 556 ntBASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Gm10355-201ENSMUST00000097146 517 ntBASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dhx40Q6PE54 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.41■□□□□ 0.22
Dhx40Q6PE54 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.41■□□□□ 0.22
Dhx40Q6PE54 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Dhx40Q6PE54 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Gm28659-201ENSMUST00000188013 759 ntBASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Gm5864-201ENSMUST00000202263 970 ntBASIC16.4■□□□□ 0.22
Dhx40Q6PE54 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms