Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.96□□□□□ -0.34
Snrnp40Q6PE01 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Gm15824-201ENSMUST00000119516 955 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Gm21854-201ENSMUST00000179901 471 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Gm18624-201ENSMUST00000220966 658 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 App-207ENSMUST00000227737 2827 ntBASIC12.95□□□□□ -0.34
Snrnp40Q6PE01 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snrnp40Q6PE01 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms