Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Casc4Q6P2L7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Casc4Q6P2L7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Casc4Q6P2L7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Casc4Q6P2L7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Casc4Q6P2L7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Gm17271-201ENSMUST00000165535 355 ntBASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Thap2-203ENSMUST00000218989 527 ntBASIC14.98□□□□□ -0.01
Casc4Q6P2L7 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Casc4Q6P2L7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Gm27301-201ENSMUST00000184012 127 ntBASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Gm43767-201ENSMUST00000198933 381 ntBASIC14.97□□□□□ -0.01
Casc4Q6P2L7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Gm45747-201ENSMUST00000212203 999 ntBASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Casc4Q6P2L7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Gm4995-201ENSMUST00000117247 432 ntBASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Casc4Q6P2L7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Casc4Q6P2L7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Casc4Q6P2L7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Casc4Q6P2L7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Casc4Q6P2L7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Casc4Q6P2L7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms