Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15□□□□□ -0.01
Sp140Q6NSQ5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15□□□□□ -0.01
Sp140Q6NSQ5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15□□□□□ -0.01
Sp140Q6NSQ5 AC154222.1-201ENSMUST00000223882 475 ntBASIC15□□□□□ -0.01
Sp140Q6NSQ5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sp140Q6NSQ5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sp140Q6NSQ5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Sp140Q6NSQ5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms