Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Col11a2Q64739 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col11a2Q64739 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Gm18905-201ENSMUST00000205454 928 ntBASIC17.57■□□□□ 0.4
Col11a2Q64739 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.57■□□□□ 0.4
Col11a2Q64739 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col11a2Q64739 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col11a2Q64739 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col11a2Q64739 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.57■□□□□ 0.4
Col11a2Q64739 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Gm13612-201ENSMUST00000119276 390 ntBASIC17.56■□□□□ 0.4
Col11a2Q64739 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Gm43094-201ENSMUST00000196549 921 ntBASIC17.56■□□□□ 0.4
Col11a2Q64739 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.56■□□□□ 0.4
Col11a2Q64739 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.56■□□□□ 0.4
Col11a2Q64739 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col11a2Q64739 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col11a2Q64739 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm37714-201ENSMUST00000194742 342 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm18027-201ENSMUST00000218947 619 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm7399-201ENSMUST00000032395 858 ntBASIC17.55■□□□□ 0.4
Col11a2Q64739 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.55■□□□□ 0.4
Col11a2Q64739 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col11a2Q64739 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col11a2Q64739 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col11a2Q64739 Gm22018-201ENSMUST00000104357 131 ntBASIC17.54■□□□□ 0.4
Col11a2Q64739 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms