Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Gm13884-201ENSMUST00000118103 829 ntBASIC14.47□□□□□ -0.09
Six3Q62233 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.47□□□□□ -0.09
Six3Q62233 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Six3Q62233 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.47□□□□□ -0.09
Six3Q62233 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.47□□□□□ -0.09
Six3Q62233 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six3Q62233 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.47□□□□□ -0.09
Six3Q62233 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.47□□□□□ -0.09
Six3Q62233 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Six3Q62233 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.46□□□□□ -0.09
Six3Q62233 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.46□□□□□ -0.09
Six3Q62233 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.46□□□□□ -0.09
Six3Q62233 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.46□□□□□ -0.09
Six3Q62233 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.46□□□□□ -0.09
Six3Q62233 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.46□□□□□ -0.09
Six3Q62233 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six3Q62233 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Six3Q62233 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six3Q62233 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.45□□□□□ -0.1
Six3Q62233 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Gm13036-201ENSMUST00000117799 748 ntBASIC14.45□□□□□ -0.1
Six3Q62233 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
Six3Q62233 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Six3Q62233 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six3Q62233 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Six3Q62233 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.44□□□□□ -0.1
Six3Q62233 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Six3Q62233 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms