Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.13■□□□□ 0.33
Scn9aQ62205 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Scn9aQ62205 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn9aQ62205 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.13■□□□□ 0.33
Scn9aQ62205 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.13■□□□□ 0.33
Scn9aQ62205 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn9aQ62205 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scn9aQ62205 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.12■□□□□ 0.33
Scn9aQ62205 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.12■□□□□ 0.33
Scn9aQ62205 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scn9aQ62205 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.12■□□□□ 0.33
Scn9aQ62205 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.12■□□□□ 0.33
Scn9aQ62205 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.12■□□□□ 0.33
Scn9aQ62205 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.12■□□□□ 0.33
Scn9aQ62205 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.12■□□□□ 0.33
Scn9aQ62205 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.12■□□□□ 0.33
Scn9aQ62205 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Scn9aQ62205 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.12■□□□□ 0.33
Scn9aQ62205 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn9aQ62205 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.11■□□□□ 0.33
Scn9aQ62205 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.11■□□□□ 0.33
Scn9aQ62205 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn9aQ62205 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Scn9aQ62205 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.11■□□□□ 0.33
Scn9aQ62205 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.11■□□□□ 0.33
Scn9aQ62205 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.11■□□□□ 0.33
Scn9aQ62205 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn9aQ62205 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.1■□□□□ 0.33
Scn9aQ62205 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Scn9aQ62205 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Gm17795-201ENSMUST00000214505 757 ntBASIC17.1■□□□□ 0.33
Scn9aQ62205 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.1■□□□□ 0.33
Scn9aQ62205 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms