Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Gm9726-201ENSMUST00000180321 678 ntBASIC19.57■□□□□ 0.72
Gli3Q61602 AU022133-201ENSMUST00000200601 873 ntBASIC19.57■□□□□ 0.72
Gli3Q61602 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.57■□□□□ 0.72
Gli3Q61602 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Gli3Q61602 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Gli3Q61602 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
Gli3Q61602 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.57■□□□□ 0.72
Gli3Q61602 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Gli3Q61602 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Gli3Q61602 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gli3Q61602 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gli3Q61602 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19.57■□□□□ 0.72
Gli3Q61602 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gli3Q61602 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli3Q61602 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.56■□□□□ 0.72
Gli3Q61602 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC19.56■□□□□ 0.72
Gli3Q61602 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.56■□□□□ 0.72
Gli3Q61602 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Gm8213-201ENSMUST00000118191 441 ntBASIC19.56■□□□□ 0.72
Gli3Q61602 Gm10156-201ENSMUST00000122364 462 ntBASIC19.56■□□□□ 0.72
Gli3Q61602 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Gm6621-201ENSMUST00000193251 772 ntBASIC19.56■□□□□ 0.72
Gli3Q61602 Gm44397-201ENSMUST00000195950 113 ntBASIC19.56■□□□□ 0.72
Gli3Q61602 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 AC166997.1-201ENSMUST00000225122 572 ntBASIC19.56■□□□□ 0.72
Gli3Q61602 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gli3Q61602 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli3Q61602 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Mir686-201ENSMUST00000102174 109 ntBASIC19.55■□□□□ 0.72
Gli3Q61602 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC19.55■□□□□ 0.72
Gli3Q61602 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC19.55■□□□□ 0.72
Gli3Q61602 CT030182.1-201ENSMUST00000225935 533 ntBASIC19.55■□□□□ 0.72
Gli3Q61602 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Gli3Q61602 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gli3Q61602 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gli3Q61602 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli3Q61602 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gli3Q61602 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Gm2606-201ENSMUST00000100754 1002 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm24255-201ENSMUST00000104481 128 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm12537-201ENSMUST00000119266 1002 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm12070-201ENSMUST00000119551 1002 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm12671-201ENSMUST00000119978 1002 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm13292-201ENSMUST00000120014 1000 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm10359-201ENSMUST00000180167 1002 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm12033-201ENSMUST00000180654 1002 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm5559-201ENSMUST00000180755 1002 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Gm7293-201ENSMUST00000216682 1007 ntBASIC19.54■□□□□ 0.72
Gli3Q61602 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.54■□□□□ 0.72
Gli3Q61602 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gli3Q61602 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.54■□□□□ 0.72
Gli3Q61602 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms