Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.9□□□□□ -0.18
Sox17Q61473 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox17Q61473 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox17Q61473 Rprl3-201ENSMUST00000157400 290 ntBASIC13.9□□□□□ -0.18
Sox17Q61473 Gm27867-201ENSMUST00000184778 125 ntBASIC13.9□□□□□ -0.18
Sox17Q61473 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.9□□□□□ -0.18
Sox17Q61473 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.9□□□□□ -0.18
Sox17Q61473 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sox17Q61473 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox17Q61473 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox17Q61473 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sox17Q61473 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox17Q61473 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sox17Q61473 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox17Q61473 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sox17Q61473 Gm10499-201ENSMUST00000174094 934 ntBASIC13.89□□□□□ -0.19
Sox17Q61473 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.89□□□□□ -0.19
Sox17Q61473 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.89□□□□□ -0.19
Sox17Q61473 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sox17Q61473 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox17Q61473 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox17Q61473 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sox17Q61473 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox17Q61473 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox17Q61473 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sox17Q61473 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sox17Q61473 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.88□□□□□ -0.19
Sox17Q61473 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.88□□□□□ -0.19
Sox17Q61473 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox17Q61473 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.88□□□□□ -0.19
Sox17Q61473 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Sox17Q61473 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.88□□□□□ -0.19
Sox17Q61473 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox17Q61473 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox17Q61473 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox17Q61473 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox17Q61473 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox17Q61473 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox17Q61473 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox17Q61473 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox17Q61473 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox17Q61473 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox17Q61473 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox17Q61473 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox17Q61473 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms