Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.44□□□□□ -0.1
Vsx2Q61412 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vsx2Q61412 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vsx2Q61412 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.43□□□□□ -0.1
Vsx2Q61412 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.43□□□□□ -0.1
Vsx2Q61412 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Gm13597-201ENSMUST00000121239 375 ntBASIC14.43□□□□□ -0.1
Vsx2Q61412 Mir3113-201ENSMUST00000175478 76 ntBASIC14.43□□□□□ -0.1
Vsx2Q61412 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.43□□□□□ -0.1
Vsx2Q61412 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx2Q61412 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vsx2Q61412 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vsx2Q61412 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.42□□□□□ -0.1
Vsx2Q61412 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vsx2Q61412 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.42□□□□□ -0.1
Vsx2Q61412 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.42□□□□□ -0.1
Vsx2Q61412 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vsx2Q61412 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx2Q61412 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Gm2213-201ENSMUST00000197485 688 ntBASIC14.41□□□□□ -0.1
Vsx2Q61412 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.41□□□□□ -0.1
Vsx2Q61412 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx2Q61412 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms