Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Mre11Q61216 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Mre11Q61216 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.72■□□□□ 0.43
Mre11Q61216 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.72■□□□□ 0.43
Mre11Q61216 Gm43799-201ENSMUST00000201845 579 ntBASIC17.72■□□□□ 0.43
Mre11Q61216 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.72■□□□□ 0.43
Mre11Q61216 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.72■□□□□ 0.43
Mre11Q61216 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.72■□□□□ 0.43
Mre11Q61216 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Mre11Q61216 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Mre11Q61216 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.72■□□□□ 0.43
Mre11Q61216 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.72■□□□□ 0.43
Mre11Q61216 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.72■□□□□ 0.43
Mre11Q61216 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mre11Q61216 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.71■□□□□ 0.43
Mre11Q61216 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mre11Q61216 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mre11Q61216 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mre11Q61216 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mre11Q61216 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.71■□□□□ 0.43
Mre11Q61216 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.71■□□□□ 0.43
Mre11Q61216 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.71■□□□□ 0.43
Mre11Q61216 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mre11Q61216 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mre11Q61216 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Mre11Q61216 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.7■□□□□ 0.42
Mre11Q61216 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Mre11Q61216 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Mre11Q61216 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.7■□□□□ 0.42
Mre11Q61216 Gm13436-201ENSMUST00000120418 567 ntBASIC17.7■□□□□ 0.42
Mre11Q61216 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Mre11Q61216 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.7■□□□□ 0.42
Mre11Q61216 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.7■□□□□ 0.42
Mre11Q61216 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.7■□□□□ 0.42
Mre11Q61216 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.7■□□□□ 0.42
Mre11Q61216 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Mre11Q61216 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mre11Q61216 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Mre11Q61216 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms