Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gm8749-201ENSMUST00000117737 331 ntBASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gm6415-201ENSMUST00000118488 348 ntBASIC15.13■□□□□ 0.01
Slc6a4Q60857 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gm27430-201ENSMUST00000184585 107 ntBASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gm44333-201ENSMUST00000197168 107 ntBASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gm18049-201ENSMUST00000208909 581 ntBASIC15.13■□□□□ 0.01
Slc6a4Q60857 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.13■□□□□ 0.01
Slc6a4Q60857 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.13■□□□□ 0.01
Slc6a4Q60857 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a4Q60857 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Gm15693-201ENSMUST00000120470 637 ntBASIC15.12■□□□□ 0.01
Slc6a4Q60857 Gm38294-201ENSMUST00000192831 381 ntBASIC15.12■□□□□ 0.01
Slc6a4Q60857 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.12■□□□□ 0.01
Slc6a4Q60857 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.12■□□□□ 0.01
Slc6a4Q60857 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a4Q60857 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.11■□□□□ 0.01
Slc6a4Q60857 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Gm18766-201ENSMUST00000189811 808 ntBASIC15.11■□□□□ 0.01
Slc6a4Q60857 Gm45098-201ENSMUST00000207179 657 ntBASIC15.11■□□□□ 0.01
Slc6a4Q60857 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.11■□□□□ 0.01
Slc6a4Q60857 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a4Q60857 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.11■□□□□ 0.01
Slc6a4Q60857 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a4Q60857 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.1■□□□□ 0.01
Slc6a4Q60857 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Slc6a4Q60857 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a4Q60857 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms