Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Gm27622-201ENSMUST00000183779 60 ntBASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Shroom1Q5SX79 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Gm27321-201ENSMUST00000185021 205 ntBASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Gm5779-201ENSMUST00000218467 910 ntBASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shroom1Q5SX79 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm9824-201ENSMUST00000178707 561 ntBASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shroom1Q5SX79 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shroom1Q5SX79 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shroom1Q5SX79 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shroom1Q5SX79 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms