Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Gm7153-201ENSMUST00000117092 455 ntBASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8d-1Q5R1H8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav8d-1Q5R1H8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms