Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-3Q5R1E6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Gm15173-201ENSMUST00000122049 433 ntBASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-3Q5R1E6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm7977-201ENSMUST00000193787 748 ntBASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm45167-201ENSMUST00000208007 322 ntBASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms