Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv4Q5R1A3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trdv4Q5R1A3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Gm13597-201ENSMUST00000121239 375 ntBASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms