Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Gm10339-203ENSMUST00000225409 1671 ntBASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Gm8810-201ENSMUST00000172895 754 ntBASIC14□□□□□ -0.17
Col27a1Q5QNQ9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Gm38266-201ENSMUST00000194931 421 ntBASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Gm45412-201ENSMUST00000210217 2275 ntBASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gm15808-201ENSMUST00000119046 604 ntBASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gm12176-201ENSMUST00000121420 875 ntBASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gm27331-201ENSMUST00000183705 60 ntBASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Gm18027-201ENSMUST00000218947 619 ntBASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col27a1Q5QNQ9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Gm12384-201ENSMUST00000119228 919 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Gm11793-201ENSMUST00000120433 981 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col27a1Q5QNQ9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms