Protein–RNA interactions for Protein: Q3U6N9

UPF0488 protein C8orf33 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U6N9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Q3U6N9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U6N9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Gm6222-201ENSMUST00000120787 396 ntBASIC14.03□□□□□ -0.16
Q3U6N9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.03□□□□□ -0.16
Q3U6N9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.03□□□□□ -0.16
Q3U6N9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.03□□□□□ -0.16
Q3U6N9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Q3U6N9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Q3U6N9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Q3U6N9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U6N9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Q3U6N9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Q3U6N9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Q3U6N9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.02□□□□□ -0.16
Q3U6N9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U6N9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Gm27838-201ENSMUST00000184829 128 ntBASIC14.02□□□□□ -0.17
Q3U6N9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Q3U6N9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Q3U6N9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.02□□□□□ -0.17
Q3U6N9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Q3U6N9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U6N9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Q3U6N9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.01□□□□□ -0.17
Q3U6N9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Q3U6N9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.01□□□□□ -0.17
Q3U6N9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Q3U6N9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.01□□□□□ -0.17
Q3U6N9 Gm14719-201ENSMUST00000121891 340 ntBASIC14.01□□□□□ -0.17
Q3U6N9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.01□□□□□ -0.17
Q3U6N9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.01□□□□□ -0.17
Q3U6N9 Gm27631-201ENSMUST00000184163 466 ntBASIC14.01□□□□□ -0.17
Q3U6N9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.01□□□□□ -0.17
Q3U6N9 Gm37230-201ENSMUST00000194491 818 ntBASIC14.01□□□□□ -0.17
Q3U6N9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.01□□□□□ -0.17
Q3U6N9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Q3U6N9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Q3U6N9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Q3U6N9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U6N9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms