Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim43aQ3TL54 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43aQ3TL54 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Gm27646-201ENSMUST00000183989 110 ntBASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43aQ3TL54 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43aQ3TL54 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms