Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim7Q3TJD7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim7Q3TJD7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Gm9002-201ENSMUST00000178437 499 ntBASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim7Q3TJD7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim7Q3TJD7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim7Q3TJD7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim7Q3TJD7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms