Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Q3KNL4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Q3KNL4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Q3KNL4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.55□□□□□ -0.08
Q3KNL4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.55□□□□□ -0.08
Q3KNL4 Gm7222-201ENSMUST00000117512 906 ntBASIC14.55□□□□□ -0.08
Q3KNL4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.55□□□□□ -0.08
Q3KNL4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.55□□□□□ -0.08
Q3KNL4 Gm7787-201ENSMUST00000216858 688 ntBASIC14.55□□□□□ -0.08
Q3KNL4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.55□□□□□ -0.08
Q3KNL4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.55□□□□□ -0.08
Q3KNL4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Q3KNL4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Q3KNL4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Q3KNL4 Gm25990-201ENSMUST00000102440 86 ntBASIC14.54□□□□□ -0.08
Q3KNL4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.54□□□□□ -0.08
Q3KNL4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.54□□□□□ -0.08
Q3KNL4 Gm9682-201ENSMUST00000197505 556 ntBASIC14.54□□□□□ -0.08
Q3KNL4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.54□□□□□ -0.08
Q3KNL4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.54□□□□□ -0.08
Q3KNL4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.54□□□□□ -0.08
Q3KNL4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.54□□□□□ -0.08
Q3KNL4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Q3KNL4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Q3KNL4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Q3KNL4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Q3KNL4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Q3KNL4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.53□□□□□ -0.08
Q3KNL4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Q3KNL4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.53□□□□□ -0.08
Q3KNL4 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.53□□□□□ -0.08
Q3KNL4 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.53□□□□□ -0.08
Q3KNL4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Q3KNL4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.53□□□□□ -0.08
Q3KNL4 Gm6376-201ENSMUST00000209407 580 ntBASIC14.53□□□□□ -0.08
Q3KNL4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Q3KNL4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.53□□□□□ -0.08
Q3KNL4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.53□□□□□ -0.08
Q3KNL4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms