Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Gm24841-201ENSMUST00000158676 357 ntBASIC12.21□□□□□ -0.45
Trim63Q38HM4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.21□□□□□ -0.45
Trim63Q38HM4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.21□□□□□ -0.46
Trim63Q38HM4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim63Q38HM4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.2□□□□□ -0.46
Trim63Q38HM4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm27454-201ENSMUST00000185090 204 ntBASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm45417-201ENSMUST00000209533 758 ntBASIC12.2□□□□□ -0.46
Trim63Q38HM4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.2□□□□□ -0.46
Trim63Q38HM4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim63Q38HM4 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.19□□□□□ -0.46
Trim63Q38HM4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Gm11927-201ENSMUST00000118472 759 ntBASIC12.19□□□□□ -0.46
Trim63Q38HM4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms