Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Gm30437-201ENSMUST00000206086 1201 ntBASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Gm9299-201ENSMUST00000206392 1140 ntBASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Gm18027-201ENSMUST00000218947 619 ntBASIC20.63■□□□□ 0.89
Trpm1Q2TV84 AC102291.3-201ENSMUST00000226566 405 ntBASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm1Q2TV84 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Gm4959-201ENSMUST00000197271 1044 ntBASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Gm4971-201ENSMUST00000205991 1108 ntBASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpm1Q2TV84 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Gm5370-201ENSMUST00000187187 574 ntBASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Gm43094-201ENSMUST00000196549 921 ntBASIC20.61■□□□□ 0.89
Trpm1Q2TV84 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm1Q2TV84 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Zscan30-202ENSMUST00000224144 1458 ntBASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Gm22018-201ENSMUST00000104357 131 ntBASIC20.6■□□□□ 0.89
Trpm1Q2TV84 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Gm5940-201ENSMUST00000117582 1068 ntBASIC20.6■□□□□ 0.89
Trpm1Q2TV84 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Gm7399-201ENSMUST00000032395 858 ntBASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm1Q2TV84 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Gm9823-201ENSMUST00000051212 327 ntBASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Dctn4-202ENSMUST00000223590 1530 ntBASIC20.59■□□□□ 0.89
Trpm1Q2TV84 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms