Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Gm8097-201ENSMUST00000117903 829 ntBASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Gm8655-201ENSMUST00000221159 852 ntBASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ptchd3Q0EEE2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ptchd3Q0EEE2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptchd3Q0EEE2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptchd3Q0EEE2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptchd3Q0EEE2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptchd3Q0EEE2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptchd3Q0EEE2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptchd3Q0EEE2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ptchd3Q0EEE2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms