Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15□□□□□ -0.01
Ebf1Q07802 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Gm16425-201ENSMUST00000118143 3130 ntBASIC15□□□□□ -0.01
Ebf1Q07802 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Gm27528-202ENSMUST00000222916 2012 ntBASIC15□□□□□ -0.01
Ebf1Q07802 Gm13517-201ENSMUST00000120782 1495 ntBASIC15□□□□□ -0.01
Ebf1Q07802 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15□□□□□ -0.01
Ebf1Q07802 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.99□□□□□ -0.01
Ebf1Q07802 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Gm6415-201ENSMUST00000118488 348 ntBASIC14.99□□□□□ -0.01
Ebf1Q07802 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Gm9824-201ENSMUST00000178707 561 ntBASIC14.99□□□□□ -0.01
Ebf1Q07802 Mir8102-201ENSMUST00000184148 139 ntBASIC14.99□□□□□ -0.01
Ebf1Q07802 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Sybu-209ENSMUST00000228639 4113 ntBASIC14.99□□□□□ -0.01
Ebf1Q07802 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf1Q07802 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.99□□□□□ -0.01
Ebf1Q07802 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.98□□□□□ -0.01
Ebf1Q07802 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
Ebf1Q07802 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ebf1Q07802 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Gm38225-201ENSMUST00000194001 393 ntBASIC14.98□□□□□ -0.01
Ebf1Q07802 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf1Q07802 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.98□□□□□ -0.01
Ebf1Q07802 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ebf1Q07802 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.97□□□□□ -0.01
Ebf1Q07802 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Gm12151-201ENSMUST00000121374 290 ntBASIC14.97□□□□□ -0.01
Ebf1Q07802 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.97□□□□□ -0.01
Ebf1Q07802 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.97□□□□□ -0.01
Ebf1Q07802 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ebf1Q07802 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Ebf1Q07802 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.97□□□□□ -0.01
Ebf1Q07802 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ebf1Q07802 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf1Q07802 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.96□□□□□ -0.01
Ebf1Q07802 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms