Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC22.35■■□□□ 1.17
Col17a1Q07563 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC22.35■■□□□ 1.17
Col17a1Q07563 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC22.35■■□□□ 1.17
Col17a1Q07563 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Col17a1Q07563 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col17a1Q07563 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC22.35■■□□□ 1.17
Col17a1Q07563 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col17a1Q07563 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Col17a1Q07563 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Col17a1Q07563 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col17a1Q07563 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col17a1Q07563 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col17a1Q07563 Mir686-201ENSMUST00000102174 109 ntBASIC22.34■■□□□ 1.17
Col17a1Q07563 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Gm11658-201ENSMUST00000120913 1008 ntBASIC22.34■■□□□ 1.17
Col17a1Q07563 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC22.34■■□□□ 1.17
Col17a1Q07563 Gm2467-201ENSMUST00000182266 1010 ntBASIC22.34■■□□□ 1.17
Col17a1Q07563 Gm6981-201ENSMUST00000182467 1008 ntBASIC22.34■■□□□ 1.17
Col17a1Q07563 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC22.34■■□□□ 1.17
Col17a1Q07563 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC22.34■■□□□ 1.17
Col17a1Q07563 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC22.34■■□□□ 1.17
Col17a1Q07563 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Col17a1Q07563 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
Col17a1Q07563 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC22.34■■□□□ 1.17
Col17a1Q07563 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col17a1Q07563 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col17a1Q07563 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Col17a1Q07563 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Col17a1Q07563 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col17a1Q07563 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col17a1Q07563 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col17a1Q07563 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC22.33■■□□□ 1.17
Col17a1Q07563 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col17a1Q07563 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Gm3508-201ENSMUST00000186012 792 ntBASIC22.33■■□□□ 1.16
Col17a1Q07563 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC22.33■■□□□ 1.16
Col17a1Q07563 Tyms-ps-201ENSMUST00000219550 915 ntBASIC22.33■■□□□ 1.16
Col17a1Q07563 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col17a1Q07563 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC22.32■■□□□ 1.16
Col17a1Q07563 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Col17a1Q07563 AC122876.1-201ENSMUST00000217619 825 ntBASIC22.32■■□□□ 1.16
Col17a1Q07563 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col17a1Q07563 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
Col17a1Q07563 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm24830-201ENSMUST00000102024 166 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm15371-201ENSMUST00000117057 784 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC22.31■■□□□ 1.16
Col17a1Q07563 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm25890-201ENSMUST00000177643 165 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Rnu1b2-201ENSMUST00000178073 165 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Rnu1b1-201ENSMUST00000178250 165 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm22614-201ENSMUST00000178300 165 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC22.31■■□□□ 1.16
Col17a1Q07563 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC22.31■■□□□ 1.16
Col17a1Q07563 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm22042-201ENSMUST00000082989 165 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm26232-201ENSMUST00000083360 166 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm24136-201ENSMUST00000083374 165 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Rnu1b6-201ENSMUST00000083839 166 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm26110-201ENSMUST00000083971 165 ntBASIC22.31■■□□□ 1.16
Col17a1Q07563 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col17a1Q07563 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC22.31■■□□□ 1.16
Col17a1Q07563 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Col17a1Q07563 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Col17a1Q07563 Gm19439-201ENSMUST00000198195 2273 ntBASIC22.3■■□□□ 1.16
Col17a1Q07563 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col17a1Q07563 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col17a1Q07563 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col17a1Q07563 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col17a1Q07563 Gm12208-201ENSMUST00000122004 163 ntBASIC22.3■■□□□ 1.16
Col17a1Q07563 n-R5s14-201ENSMUST00000122688 107 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms