Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Notch1Q01705 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Notch1Q01705 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Notch1Q01705 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.67□□□□□ -0.7
Notch1Q01705 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.67□□□□□ -0.7
Notch1Q01705 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.67□□□□□ -0.7
Notch1Q01705 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.67□□□□□ -0.7
Notch1Q01705 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Notch1Q01705 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Notch1Q01705 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Notch1Q01705 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Notch1Q01705 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.66□□□□□ -0.7
Notch1Q01705 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.66□□□□□ -0.7
Notch1Q01705 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.66□□□□□ -0.7
Notch1Q01705 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.66□□□□□ -0.7
Notch1Q01705 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Notch1Q01705 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Notch1Q01705 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.66□□□□□ -0.7
Notch1Q01705 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Notch1Q01705 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.66□□□□□ -0.7
Notch1Q01705 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC10.65□□□□□ -0.7
Notch1Q01705 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Notch1Q01705 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.65□□□□□ -0.7
Notch1Q01705 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Notch1Q01705 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Notch1Q01705 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Gm9522-201ENSMUST00000182394 926 ntBASIC10.65□□□□□ -0.7
Notch1Q01705 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.65□□□□□ -0.7
Notch1Q01705 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Notch1Q01705 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Notch1Q01705 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Notch1Q01705 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.65□□□□□ -0.7
Notch1Q01705 Snora78-201ENSMUST00000158630 128 ntBASIC10.65□□□□□ -0.7
Notch1Q01705 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Notch1Q01705 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Notch1Q01705 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Notch1Q01705 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Notch1Q01705 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Notch1Q01705 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Notch1Q01705 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms