Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Gm9385-201ENSMUST00000117563 472 ntBASIC13.98□□□□□ -0.17
Nkx3-2P97503 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Gm11745-201ENSMUST00000121669 448 ntBASIC13.98□□□□□ -0.17
Nkx3-2P97503 Gm18889-201ENSMUST00000174284 929 ntBASIC13.98□□□□□ -0.17
Nkx3-2P97503 Mir6990-201ENSMUST00000183724 91 ntBASIC13.98□□□□□ -0.17
Nkx3-2P97503 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Gm18057-201ENSMUST00000208220 503 ntBASIC13.98□□□□□ -0.17
Nkx3-2P97503 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.98□□□□□ -0.17
Nkx3-2P97503 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.98□□□□□ -0.17
Nkx3-2P97503 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx3-2P97503 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Sybu-209ENSMUST00000228639 4113 ntBASIC13.97□□□□□ -0.17
Nkx3-2P97503 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.97□□□□□ -0.17
Nkx3-2P97503 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Gm44872-201ENSMUST00000207864 420 ntBASIC13.97□□□□□ -0.17
Nkx3-2P97503 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.97□□□□□ -0.17
Nkx3-2P97503 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.97□□□□□ -0.17
Nkx3-2P97503 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx3-2P97503 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.96□□□□□ -0.17
Nkx3-2P97503 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.96□□□□□ -0.17
Nkx3-2P97503 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.96□□□□□ -0.17
Nkx3-2P97503 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Gm16026-204ENSMUST00000162652 683 ntBASIC13.96□□□□□ -0.17
Nkx3-2P97503 Gm44335-201ENSMUST00000196879 141 ntBASIC13.96□□□□□ -0.17
Nkx3-2P97503 Gm44297-201ENSMUST00000198304 141 ntBASIC13.96□□□□□ -0.17
Nkx3-2P97503 Gm44346-201ENSMUST00000198851 141 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms