Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hmgb1P63158 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.27■□□□□ 0.2
Hmgb1P63158 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmgb1P63158 Mir8098-201ENSMUST00000184011 137 ntBASIC16.27■□□□□ 0.2
Hmgb1P63158 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmgb1P63158 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmgb1P63158 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Hmgb1P63158 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.27■□□□□ 0.2
Hmgb1P63158 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb1P63158 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hmgb1P63158 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Hmgb1P63158 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb1P63158 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb1P63158 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb1P63158 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hmgb1P63158 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.27■□□□□ 0.19
Hmgb1P63158 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb1P63158 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hmgb1P63158 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.26■□□□□ 0.19
Hmgb1P63158 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hmgb1P63158 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hmgb1P63158 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.26■□□□□ 0.19
Hmgb1P63158 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb1P63158 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.25■□□□□ 0.19
Hmgb1P63158 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.25■□□□□ 0.19
Hmgb1P63158 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.25■□□□□ 0.19
Hmgb1P63158 Gm11452-201ENSMUST00000122376 690 ntBASIC16.25■□□□□ 0.19
Hmgb1P63158 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Hmgb1P63158 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.25■□□□□ 0.19
Hmgb1P63158 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hmgb1P63158 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb1P63158 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms