Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Ybx1P62960 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.12■□□□□ 0.01
Ybx1P62960 Gm5479-201ENSMUST00000160578 435 ntBASIC15.12■□□□□ 0.01
Ybx1P62960 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.12■□□□□ 0.01
Ybx1P62960 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ybx1P62960 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.12■□□□□ 0.01
Ybx1P62960 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ybx1P62960 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ybx1P62960 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ybx1P62960 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.12■□□□□ 0.01
Ybx1P62960 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.11■□□□□ 0.01
Ybx1P62960 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.11■□□□□ 0.01
Ybx1P62960 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.11■□□□□ 0.01
Ybx1P62960 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ybx1P62960 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.11■□□□□ 0.01
Ybx1P62960 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Gm9719-201ENSMUST00000162765 543 ntBASIC15.11■□□□□ 0.01
Ybx1P62960 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.11■□□□□ 0.01
Ybx1P62960 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.11■□□□□ 0.01
Ybx1P62960 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.11■□□□□ 0.01
Ybx1P62960 Shd-206ENSMUST00000225145 998 ntBASIC15.11■□□□□ 0.01
Ybx1P62960 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ybx1P62960 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.11■□□□□ 0.01
Ybx1P62960 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ybx1P62960 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ybx1P62960 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.1■□□□□ 0.01
Ybx1P62960 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Gm24543-201ENSMUST00000103867 82 ntBASIC15.1■□□□□ 0.01
Ybx1P62960 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Gm5566-201ENSMUST00000116118 459 ntBASIC15.1■□□□□ 0.01
Ybx1P62960 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.1■□□□□ 0.01
Ybx1P62960 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.1■□□□□ 0.01
Ybx1P62960 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.1■□□□□ 0.01
Ybx1P62960 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
Ybx1P62960 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ybx1P62960 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ybx1P62960 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ybx1P62960 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.09■□□□□ 0.01
Ybx1P62960 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.09■□□□□ 0.01
Ybx1P62960 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ybx1P62960 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ybx1P62960 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms