Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rpl39P62892 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.57□□□□□ -0.72
Rpl39P62892 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rpl39P62892 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rpl39P62892 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.56□□□□□ -0.72
Rpl39P62892 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rpl39P62892 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rpl39P62892 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Gm10013-201ENSMUST00000106074 672 ntBASIC10.56□□□□□ -0.72
Rpl39P62892 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.56□□□□□ -0.72
Rpl39P62892 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Gm6345-202ENSMUST00000180900 204 ntBASIC10.56□□□□□ -0.72
Rpl39P62892 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.56□□□□□ -0.72
Rpl39P62892 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rpl39P62892 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.56□□□□□ -0.72
Rpl39P62892 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.56□□□□□ -0.72
Rpl39P62892 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.56□□□□□ -0.72
Rpl39P62892 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.56□□□□□ -0.72
Rpl39P62892 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rpl39P62892 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Rpl39P62892 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rpl39P62892 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.56□□□□□ -0.72
Rpl39P62892 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpl39P62892 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.55□□□□□ -0.72
Rpl39P62892 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rpl39P62892 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.55□□□□□ -0.72
Rpl39P62892 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rpl39P62892 Gm8344-201ENSMUST00000119813 856 ntBASIC10.55□□□□□ -0.72
Rpl39P62892 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rpl39P62892 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.55□□□□□ -0.72
Rpl39P62892 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.55□□□□□ -0.72
Rpl39P62892 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.55□□□□□ -0.72
Rpl39P62892 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.55□□□□□ -0.72
Rpl39P62892 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.55□□□□□ -0.72
Rpl39P62892 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.55□□□□□ -0.72
Rpl39P62892 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl39P62892 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms