Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Gm13597-201ENSMUST00000121239 375 ntBASIC12.97□□□□□ -0.33
Lsm6P62313 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm6P62313 Psmb5-202ENSMUST00000227257 622 ntBASIC12.97□□□□□ -0.33
Lsm6P62313 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.97□□□□□ -0.33
Lsm6P62313 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lsm6P62313 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.97□□□□□ -0.33
Lsm6P62313 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm6P62313 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.96□□□□□ -0.33
Lsm6P62313 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lsm6P62313 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lsm6P62313 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lsm6P62313 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.96□□□□□ -0.33
Lsm6P62313 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.96□□□□□ -0.33
Lsm6P62313 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lsm6P62313 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lsm6P62313 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.96□□□□□ -0.33
Lsm6P62313 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.96□□□□□ -0.33
Lsm6P62313 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.96□□□□□ -0.33
Lsm6P62313 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.96□□□□□ -0.33
Lsm6P62313 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm6P62313 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm6P62313 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm6P62313 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.96□□□□□ -0.34
Lsm6P62313 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm6P62313 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm6P62313 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm6P62313 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.96□□□□□ -0.34
Lsm6P62313 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm6P62313 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm6P62313 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lsm6P62313 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
Lsm6P62313 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm6P62313 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.95□□□□□ -0.34
Lsm6P62313 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lsm6P62313 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm6P62313 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.95□□□□□ -0.34
Lsm6P62313 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.95□□□□□ -0.34
Lsm6P62313 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lsm6P62313 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.95□□□□□ -0.34
Lsm6P62313 Gm8749-201ENSMUST00000117737 331 ntBASIC12.95□□□□□ -0.34
Lsm6P62313 Gm16026-204ENSMUST00000162652 683 ntBASIC12.95□□□□□ -0.34
Lsm6P62313 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm6P62313 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.95□□□□□ -0.34
Lsm6P62313 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.95□□□□□ -0.34
Lsm6P62313 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Gm7461-201ENSMUST00000058918 827 ntBASIC12.95□□□□□ -0.34
Lsm6P62313 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lsm6P62313 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms