Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm3P62311 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm3P62311 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.51□□□□□ -0.25
Lsm3P62311 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.5□□□□□ -0.25
Lsm3P62311 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.5□□□□□ -0.25
Lsm3P62311 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lsm3P62311 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lsm3P62311 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.5□□□□□ -0.25
Lsm3P62311 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Lsm3P62311 Gm16061-201ENSMUST00000122167 857 ntBASIC13.5□□□□□ -0.25
Lsm3P62311 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.5□□□□□ -0.25
Lsm3P62311 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.5□□□□□ -0.25
Lsm3P62311 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lsm3P62311 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.5□□□□□ -0.25
Lsm3P62311 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lsm3P62311 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.5□□□□□ -0.25
Lsm3P62311 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm3P62311 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lsm3P62311 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm3P62311 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.49□□□□□ -0.25
Lsm3P62311 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm3P62311 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm3P62311 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lsm3P62311 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lsm3P62311 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm3P62311 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lsm3P62311 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lsm3P62311 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lsm3P62311 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.48□□□□□ -0.25
Lsm3P62311 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lsm3P62311 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.48□□□□□ -0.25
Lsm3P62311 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms