Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.92□□□□□ -0.5
Lmo4P61969 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.92□□□□□ -0.5
Lmo4P61969 Gm7730-201ENSMUST00000212486 454 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.92□□□□□ -0.5
Lmo4P61969 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.91□□□□□ -0.5
Lmo4P61969 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lmo4P61969 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.91□□□□□ -0.5
Lmo4P61969 Gm27838-201ENSMUST00000184829 128 ntBASIC11.91□□□□□ -0.5
Lmo4P61969 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lmo4P61969 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Dupd1-202ENSMUST00000224735 548 ntBASIC11.91□□□□□ -0.5
Lmo4P61969 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.91□□□□□ -0.5
Lmo4P61969 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lmo4P61969 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.91□□□□□ -0.5
Lmo4P61969 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.91□□□□□ -0.5
Lmo4P61969 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lmo4P61969 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.9□□□□□ -0.5
Lmo4P61969 Asic1-205ENSMUST00000228185 1818 ntBASIC11.9□□□□□ -0.5
Lmo4P61969 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lmo4P61969 Syt7-204ENSMUST00000223586 1344 ntBASIC11.9□□□□□ -0.5
Lmo4P61969 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lmo4P61969 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lmo4P61969 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.9□□□□□ -0.5
Lmo4P61969 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Lmo4P61969 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.9□□□□□ -0.5
Lmo4P61969 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.9□□□□□ -0.5
Lmo4P61969 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.9□□□□□ -0.5
Lmo4P61969 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.9□□□□□ -0.5
Lmo4P61969 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lmo4P61969 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lmo4P61969 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lmo4P61969 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.9□□□□□ -0.5
Lmo4P61969 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lmo4P61969 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms